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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs7736669 chr5:1608591 A/G 0.000128 490 21.97 16.63 15.48 KM Plot
THCA rs77368673 chr3:67871347 A/G 0.000252 486 15.68 17.6 14.03 KM Plot
THCA rs77374467 chr6:24475278 G/A 0 484 16.57 14.77 8.88 KM Plot
THCA rs77376252 chr10:81809382 C/T 5.58E-5 476 15.97 15.9 12.62 KM Plot
THCA rs77376446 chr7:16468347 T/C 1.24E-10 481 15.13 17.02 18.82 KM Plot
THCA rs77380349 chr2:48056168 C/G 1.14E-7 487 15.3 17.93 8.27 KM Plot
THCA rs7738071 chr6:133085116 G/A 6.33E-7 482 15.75 15.7 17.93 KM Plot
THCA rs7738400 chr6:133085301 G/C 1.18E-6 482 15.75 16.2 17.77 KM Plot
THCA rs77387973 chr6:24422316 T/G 5.55E-15 488 16.37 14.85 11.07 KM Plot
THCA rs77434215 chr3:67889123 A/G 0.000263 486 15.65 17.62 19.7 KM Plot
THCA rs7743725 chr6:153300790 A/G 0 489 15.17 18.32 6.92 KM Plot
THCA rs77440066 chr1:86243059 T/C 0.000204 486 15.93 15.42 7.13 KM Plot
THCA rs77453855 chr5:96204399 T/C 3.31E-6 487 15.17 16.9 20.83 KM Plot
THCA rs7746418 chr6:40781232 C/T 8.01E-6 490 15.68 16.8 34.1 KM Plot
THCA rs7747849 chr6:153300815 T/C 0 489 15.17 18.32 6.92 KM Plot